Solution Overview

Our solution for Translational Research and Computational Biomarker Development includes:

  • Per-modality feature engineering and multi-modal integration to enable composite biomarker identification.
  • Integration of clinical and pre-clinical biomarker data to enable translation and responding population analytics.
  • Design and development of systems to track and manage public data from research papers and public databases, including tools for updating and querying data.
  • Implementation of analytics platforms using tools like AWS Sagemaker for building and testing predictive models that leverage machine learning and AI.
  • Integration with lab and clinical data systems, both in-house and from partners, to reliably create data packages that contain molecular/imaging data with blinded or unblinded clinical/sample data.

Solution Benefits

Partnering with bPrescient benefits your R&D program in a variety of ways:

  • Improve biomarker robustness and decrease research/development cycle time by leveraging the full body of biomedical literature across discovery.
  • Integrative analytics for biomarker identification can use all available in-house and public data across many modalities.
  • Identify the components of a composite biomarker that yield the best clinical and translational results.
  • Improve the success rates of clinical trials by deconvolving patient heterogeneity.
  • Data is accurately linked to patient and sample metadata so analyses can identify robust markers that connect assay signals to patient outcomes and adverse events.

Relevant Expertise

This service draws on our expertise in the following areas:

  • Strategy & Roadmap Development
  • Scientific Informatics: Software Design and Implementation
  • AI & Machine Learning: Generating Novel Insights
  • Computational Sciences for Biology & Chemistry Research
  • Data Engineering, MLOps, and CloudOps

Learn more about our expertise

Example Tools and Data Sources

We use a variety of tools and data sources to meet specific client needs, including the following:

Data Sources

  • PubMed
  • Genbank
  • Reactome
  • The Cancer Genome Atlas
  • UK Biobank
  • DepMap

Tools

  • Bioconductor / R
  • Python / Biopython
  • Qiagen IPA
  • DNAnexus
  • AlphaFold
  • SimTK
  • RoseTTAFold
  • RFdiffusion
  • Boltz-1

Let’s talk

Tell us about your toughest R&D challenge and let’s discuss how bPrescient can solve it.

+1 781 312 9317
info@bprescient.com